BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012A06SP1|AL426301
(786 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1463 1530 0.0
>3x_Contig1463
Length = 9363
Score = 1530 bits (770), Expect = 0.0
Identities = 779/782 (99%), Gaps = 1/782 (0%)
Strand = Plus / Plus
Query: 1 taatacttgntgattataaactgtctccgcgttgcagaaaccgttactaaagccttggaa 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 taatacttg-tgattataaactgtctccgcgttgcagaaaccgttactaaagccttggaa 433
Query: 61 tatgaagtgtcaatgatgtgtatatgtttcaactatacatattcgagaagcaagaacgga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 tatgaagtgtcaatgatgtgtatatgtttcaactatacatattcgagaagcaagaacgga 493
Query: 121 acacggaacacggaaaaaaaaaaaaaaaaaaagacggaacgcggcgcttagctttcccag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 acacggaacacggaaaaaaaaaaaaaaaaaaagacggaacgcggcgcttagctttcccag 553
Query: 181 caaaagaagataagaatactcaatgcttcgggctattgattgatattgctggccaatgga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 caaaagaagataagaatactcaatgcttcgggctattgattgatattgctggccaatgga 613
Query: 241 ctgtacactgcaacatggatagagaaaactcgggttggaatagatagatgtatccaaaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 ctgtacactgcaacatggatagagaaaactcgggttggaatagatagatgtatccaaaaa 673
Query: 301 cgctgacactttgttccmcttagctgtcattaaatgatgcaaggratggaaggggaaatt 360
||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct: 674 cgctgacactttgttccacttagctgtcattaaatgatgcaaggaatggaaggggaaatt 733
Query: 361 gagttcccaagtcacgtgattttaatcacgtgaacaactatcaccaaatccgggtaaggg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 gagttcccaagtcacgtgattttaatcacgtgaacaactatcaccaaatccgggtaaggg 793
Query: 421 gtttctcaattcctgaaaatcaaaggaaagaaaaaaaaactgaaattgaaacaaaacaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 gtttctcaattcctgaaaatcaaaggaaagaaaaaaaaactgaaattgaaacaaaacaaa 853
Query: 481 gctatattaagtattcaaagactcattgttaaatgaatcttttatactgtttgatgtgtc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 854 gctatattaagtattcaaagactcattgttaaatgaatcttttatactgtttgatgtgtc 913
Query: 541 tttcttttcattctagttgaccaaggttattgtgtttgaatcttcctacctgtgatatcc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 914 tttcttttcattctagttgaccaaggttattgtgtttgaatcttcctacctgtgatatcc 973
Query: 601 attttttttctcagcagcgaccgttgttgtccttttttgtttctttgtttcttttgtttc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 974 attttttttctcagcagcgaccgttgttgtccttttttgtttctttgtttcttttgtttc 1033
Query: 661 cttttttcccgcctgctttgattcctttcgatagtaaggattttcttatatctttcaaag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1034 cttttttcccgcctgctttgattcctttcgatagtaaggattttcttatatctttcaaag 1093
Query: 721 ctgtaatctacaatcgataaggctcatcatcatcatctctcattccctgtacattagtgt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1094 ctgtaatctacaatcgataaggctcatcatcatcatctctcattccctgtacattagtgt 1153
Query: 781 aa 782
||
Sbjct: 1154 aa 1155
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 22,902
Number of Sequences: 1807
Number of extensions: 22902
Number of successful extensions: 3779
Number of sequences better than 1.0e-20: 1
length of query: 786
length of database: 10,358,551
effective HSP length: 16
effective length of query: 770
effective length of database: 10,329,639
effective search space: 7953822030
effective search space used: 7953822030
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)